Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd2Q9CZB3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd2Q9CZB3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd2Q9CZB3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.68■□□□□ 0.9
Thumpd2Q9CZB3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd2Q9CZB3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd2Q9CZB3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.66■□□□□ 0.9
Thumpd2Q9CZB3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Thumpd2Q9CZB3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd2Q9CZB3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd2Q9CZB3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd2Q9CZB3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Thumpd2Q9CZB3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.64■□□□□ 0.89
Thumpd2Q9CZB3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.64■□□□□ 0.89
Thumpd2Q9CZB3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Thumpd2Q9CZB3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.64■□□□□ 0.89
Thumpd2Q9CZB3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thumpd2Q9CZB3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd2Q9CZB3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd2Q9CZB3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Thumpd2Q9CZB3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd2Q9CZB3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd2Q9CZB3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Thumpd2Q9CZB3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd2Q9CZB3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd2Q9CZB3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd2Q9CZB3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd2Q9CZB3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd2Q9CZB3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd2Q9CZB3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.59■□□□□ 0.89
Thumpd2Q9CZB3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.59■□□□□ 0.89
Thumpd2Q9CZB3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd2Q9CZB3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.58■□□□□ 0.89
Thumpd2Q9CZB3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd2Q9CZB3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.58■□□□□ 0.89
Thumpd2Q9CZB3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd2Q9CZB3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd2Q9CZB3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.58■□□□□ 0.89
Thumpd2Q9CZB3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Thumpd2Q9CZB3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Thumpd2Q9CZB3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.58■□□□□ 0.88
Thumpd2Q9CZB3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Thumpd2Q9CZB3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd2Q9CZB3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd2Q9CZB3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms