Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim13Q9CYB0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim13Q9CYB0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Trim13Q9CYB0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim13Q9CYB0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim13Q9CYB0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim13Q9CYB0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim13Q9CYB0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim13Q9CYB0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim13Q9CYB0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms