Protein–RNA interactions for Protein: Q9CX13

Cnih4, Protein cornichon homolog 4, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih4Q9CX13 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cnih4Q9CX13 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih4Q9CX13 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnih4Q9CX13 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cnih4Q9CX13 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cnih4Q9CX13 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cnih4Q9CX13 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cnih4Q9CX13 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cnih4Q9CX13 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnih4Q9CX13 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Gm27454-201ENSMUST00000185090 204 ntBASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Gm43137-201ENSMUST00000198052 594 ntBASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnih4Q9CX13 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnih4Q9CX13 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms