Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pfdn1Q9CWM4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn1Q9CWM4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.35■□□□□ 0.37
Pfdn1Q9CWM4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Nkain2-201ENSMUST00000092602 558 ntBASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.34■□□□□ 0.37
Pfdn1Q9CWM4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn1Q9CWM4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn1Q9CWM4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pfdn1Q9CWM4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn1Q9CWM4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Pfdn1Q9CWM4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn1Q9CWM4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms