Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Sec61bQ9CQS8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61bQ9CQS8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Gm29257-201ENSMUST00000186115 639 ntBASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61bQ9CQS8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61bQ9CQS8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 AV356131-201ENSMUST00000206201 750 ntBASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Gm9988-201ENSMUST00000069786 435 ntBASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.55□□□□□ -0.72
Sec61bQ9CQS8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61bQ9CQS8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms