Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gtf2ird2Q99NI3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2ird2Q99NI3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gtf2ird2Q99NI3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gtf2ird2Q99NI3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gtf2ird2Q99NI3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Smad6-203ENSMUST00000179458 273 ntBASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2ird2Q99NI3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
Gtf2ird2Q99NI3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.24■□□□□ 0.83
Gtf2ird2Q99NI3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gtf2ird2Q99NI3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf2ird2Q99NI3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf2ird2Q99NI3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Gtf2ird2Q99NI3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Gtf2ird2Q99NI3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf2ird2Q99NI3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf2ird2Q99NI3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gtf2ird2Q99NI3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf2ird2Q99NI3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms