Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx6-1Q99MA9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx6-1Q99MA9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx6-1Q99MA9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx6-1Q99MA9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx6-1Q99MA9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx6-1Q99MA9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx6-1Q99MA9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx6-1Q99MA9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx6-1Q99MA9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.52■□□□□ 0.56
Nkx6-1Q99MA9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx6-1Q99MA9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx6-1Q99MA9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx6-1Q99MA9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx6-1Q99MA9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx6-1Q99MA9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx6-1Q99MA9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx6-1Q99MA9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Gm13168-201ENSMUST00000121771 632 ntBASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx6-1Q99MA9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.49■□□□□ 0.55
Nkx6-1Q99MA9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx6-1Q99MA9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx6-1Q99MA9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.46■□□□□ 0.55
Nkx6-1Q99MA9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Nkx6-1Q99MA9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nkx6-1Q99MA9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms