Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Homer3Q99JP6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Homer3Q99JP6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Homer3Q99JP6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Homer3Q99JP6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Homer3Q99JP6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Homer3Q99JP6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.61■□□□□ 0.73
Homer3Q99JP6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Homer3Q99JP6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Homer3Q99JP6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Homer3Q99JP6 Gm5921-201ENSMUST00000075898 882 ntBASIC19.6■□□□□ 0.73
Homer3Q99JP6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Homer3Q99JP6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Homer3Q99JP6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Homer3Q99JP6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Homer3Q99JP6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Homer3Q99JP6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Homer3Q99JP6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Homer3Q99JP6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Homer3Q99JP6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Homer3Q99JP6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Homer3Q99JP6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Homer3Q99JP6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Homer3Q99JP6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Homer3Q99JP6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Homer3Q99JP6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Homer3Q99JP6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Homer3Q99JP6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Homer3Q99JP6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Homer3Q99JP6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Homer3Q99JP6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Homer3Q99JP6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Homer3Q99JP6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Homer3Q99JP6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Homer3Q99JP6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Homer3Q99JP6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Homer3Q99JP6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Homer3Q99JP6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Homer3Q99JP6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.51■□□□□ 0.71
Homer3Q99JP6 Gm40881-201ENSMUST00000223397 166 ntBASIC19.51■□□□□ 0.71
Homer3Q99JP6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms