Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhac1Q91Y10 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhac1Q91Y10 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhac1Q91Y10 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhac1Q91Y10 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhac1Q91Y10 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhac1Q91Y10 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhac1Q91Y10 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhac1Q91Y10 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhac1Q91Y10 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Gm7143-201ENSMUST00000222811 859 ntBASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhac1Q91Y10 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhac1Q91Y10 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhac1Q91Y10 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdhac1Q91Y10 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhac1Q91Y10 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Pcdhac1Q91Y10 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhac1Q91Y10 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhac1Q91Y10 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhac1Q91Y10 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Pcdhac1Q91Y10 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms