Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhac2Q91Y09 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhac2Q91Y09 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhac2Q91Y09 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdhac2Q91Y09 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhac2Q91Y09 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhac2Q91Y09 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhac2Q91Y09 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhac2Q91Y09 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhac2Q91Y09 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac2Q91Y09 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhac2Q91Y09 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac2Q91Y09 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac2Q91Y09 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Gm12933-201ENSMUST00000120203 872 ntBASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhac2Q91Y09 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhac2Q91Y09 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhac2Q91Y09 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhac2Q91Y09 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhac2Q91Y09 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhac2Q91Y09 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhac2Q91Y09 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhac2Q91Y09 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhac2Q91Y09 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhac2Q91Y09 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdhac2Q91Y09 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhac2Q91Y09 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhac2Q91Y09 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhac2Q91Y09 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhac2Q91Y09 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhac2Q91Y09 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdhac2Q91Y09 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.49■■□□□ 1.03
Pcdhac2Q91Y09 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhac2Q91Y09 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhac2Q91Y09 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms