Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Mir7075-201ENSMUST00000184187 82 ntBASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga4Q91XY4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Mir6236-201ENSMUST00000184437 123 ntBASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.27■□□□□ 0.68
Pcdhga4Q91XY4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhga4Q91XY4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga4Q91XY4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga4Q91XY4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Gm8493-201ENSMUST00000196881 489 ntBASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga4Q91XY4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 Gm6139-201ENSMUST00000079261 882 ntBASIC19.23■□□□□ 0.67
Pcdhga4Q91XY4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga4Q91XY4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga4Q91XY4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcdhga4Q91XY4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms