Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhgb4Q91XX6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Pcdhgb4Q91XX6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhgb4Q91XX6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb4Q91XX6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb4Q91XX6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdhgb4Q91XX6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb4Q91XX6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb4Q91XX6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb4Q91XX6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb4Q91XX6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb4Q91XX6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb4Q91XX6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgb4Q91XX6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Pcdhgb4Q91XX6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb4Q91XX6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb4Q91XX6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb4Q91XX6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb4Q91XX6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb4Q91XX6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb4Q91XX6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Pcdhgb4Q91XX6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdhgb4Q91XX6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb4Q91XX6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhgb4Q91XX6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Pcdhgb4Q91XX6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb4Q91XX6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhgb4Q91XX6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb4Q91XX6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgb4Q91XX6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgb4Q91XX6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhgb4Q91XX6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms