Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc3Q91XX1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc3Q91XX1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc3Q91XX1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhgc3Q91XX1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgc3Q91XX1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhgc3Q91XX1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdhgc3Q91XX1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhgc3Q91XX1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc3Q91XX1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc3Q91XX1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc3Q91XX1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms