Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.56■□□□□ 0.72
Vsx1Q91V10 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vsx1Q91V10 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.56■□□□□ 0.72
Vsx1Q91V10 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.56■□□□□ 0.72
Vsx1Q91V10 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vsx1Q91V10 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.56■□□□□ 0.72
Vsx1Q91V10 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.55■□□□□ 0.72
Vsx1Q91V10 Gm22325-201ENSMUST00000158904 308 ntBASIC19.55■□□□□ 0.72
Vsx1Q91V10 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.55■□□□□ 0.72
Vsx1Q91V10 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.55■□□□□ 0.72
Vsx1Q91V10 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.55■□□□□ 0.72
Vsx1Q91V10 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vsx1Q91V10 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Gm4968-201ENSMUST00000071458 858 ntBASIC19.54■□□□□ 0.72
Vsx1Q91V10 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vsx1Q91V10 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vsx1Q91V10 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.53■□□□□ 0.72
Vsx1Q91V10 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.53■□□□□ 0.72
Vsx1Q91V10 Gm7514-201ENSMUST00000209475 934 ntBASIC19.53■□□□□ 0.72
Vsx1Q91V10 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vsx1Q91V10 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vsx1Q91V10 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vsx1Q91V10 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vsx1Q91V10 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Gm12527-201ENSMUST00000117967 564 ntBASIC19.52■□□□□ 0.72
Vsx1Q91V10 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vsx1Q91V10 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vsx1Q91V10 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vsx1Q91V10 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Vsx1Q91V10 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Mir5133-201ENSMUST00000174955 77 ntBASIC19.51■□□□□ 0.71
Vsx1Q91V10 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.51■□□□□ 0.71
Vsx1Q91V10 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vsx1Q91V10 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Gm20760-201ENSMUST00000179197 648 ntBASIC19.5■□□□□ 0.71
Vsx1Q91V10 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Notumos-201ENSMUST00000151998 2659 ntBASIC19.5■□□□□ 0.71
Vsx1Q91V10 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx1Q91V10 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Mir7071-201ENSMUST00000184847 69 ntBASIC19.49■□□□□ 0.71
Vsx1Q91V10 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx1Q91V10 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.48■□□□□ 0.71
Vsx1Q91V10 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx1Q91V10 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms