Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40cQ8VHQ4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rab40cQ8VHQ4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rab40cQ8VHQ4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Rab40cQ8VHQ4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40cQ8VHQ4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40cQ8VHQ4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40cQ8VHQ4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms