Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40bQ8VHP8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40bQ8VHP8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40bQ8VHP8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40bQ8VHP8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40bQ8VHP8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
Rab40bQ8VHP8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rab40bQ8VHP8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Mir6236-201ENSMUST00000184437 123 ntBASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40bQ8VHP8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40bQ8VHP8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40bQ8VHP8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40bQ8VHP8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Rab40bQ8VHP8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40bQ8VHP8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab40bQ8VHP8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab40bQ8VHP8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab40bQ8VHP8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms