Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Mir5133-201ENSMUST00000174955 77 ntBASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc71Q8VEG0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc71Q8VEG0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc71Q8VEG0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc71Q8VEG0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Ccdc71Q8VEG0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc71Q8VEG0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc71Q8VEG0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.58■□□□□ 0.88
Ccdc71Q8VEG0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc71Q8VEG0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc71Q8VEG0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc71Q8VEG0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc71Q8VEG0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc71Q8VEG0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc71Q8VEG0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.55■□□□□ 0.88
Ccdc71Q8VEG0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.55■□□□□ 0.88
Ccdc71Q8VEG0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc71Q8VEG0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc71Q8VEG0 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc71Q8VEG0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc71Q8VEG0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc71Q8VEG0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc71Q8VEG0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc71Q8VEG0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Gm38205-201ENSMUST00000192243 258 ntBASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms