Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg1dQ8VE91 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg1dQ8VE91 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg1dQ8VE91 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.43■□□□□ 0.7
Retreg1dQ8VE91 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg1dQ8VE91 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg1dQ8VE91 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg1dQ8VE91 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg1dQ8VE91 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg1dQ8VE91 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retreg1dQ8VE91 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg1dQ8VE91 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Retreg1dQ8VE91 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.39■□□□□ 0.7
Retreg1dQ8VE91 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retreg1dQ8VE91 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Gm18284-201ENSMUST00000172604 624 ntBASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retreg1dQ8VE91 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Retreg1dQ8VE91 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg1dQ8VE91 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg1dQ8VE91 Gm26833-201ENSMUST00000180899 440 ntBASIC19.37■□□□□ 0.69
Retreg1dQ8VE91 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.37■□□□□ 0.69
Retreg1dQ8VE91 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg1dQ8VE91 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg1dQ8VE91 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Gm8495-201ENSMUST00000188740 694 ntBASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg1dQ8VE91 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retreg1dQ8VE91 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg1dQ8VE91 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg1dQ8VE91 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms