Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uhrf1Q8VDF2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uhrf1Q8VDF2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uhrf1Q8VDF2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uhrf1Q8VDF2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uhrf1Q8VDF2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Uhrf1Q8VDF2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.45■□□□□ 0.86
Uhrf1Q8VDF2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uhrf1Q8VDF2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Uhrf1Q8VDF2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uhrf1Q8VDF2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uhrf1Q8VDF2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uhrf1Q8VDF2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Uhrf1Q8VDF2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uhrf1Q8VDF2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.43■□□□□ 0.86
Uhrf1Q8VDF2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uhrf1Q8VDF2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uhrf1Q8VDF2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Uhrf1Q8VDF2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Gm20760-201ENSMUST00000179197 648 ntBASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uhrf1Q8VDF2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 Gm12527-201ENSMUST00000117967 564 ntBASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 Gm13148-201ENSMUST00000118892 745 ntBASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Uhrf1Q8VDF2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Uhrf1Q8VDF2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Uhrf1Q8VDF2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Uhrf1Q8VDF2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Uhrf1Q8VDF2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms