Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp33Q8R5K2 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.75■■□□□ 1.23
Usp33Q8R5K2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp33Q8R5K2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Usp33Q8R5K2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp33Q8R5K2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp33Q8R5K2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Usp33Q8R5K2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.73■■□□□ 1.23
Usp33Q8R5K2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Usp33Q8R5K2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp33Q8R5K2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp33Q8R5K2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp33Q8R5K2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp33Q8R5K2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp33Q8R5K2 Mir5133-201ENSMUST00000174955 77 ntBASIC22.71■■□□□ 1.23
Usp33Q8R5K2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp33Q8R5K2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp33Q8R5K2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Usp33Q8R5K2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp33Q8R5K2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp33Q8R5K2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp33Q8R5K2 Gm12441-201ENSMUST00000121806 588 ntBASIC22.7■■□□□ 1.22
Usp33Q8R5K2 Nespas-201ENSMUST00000143738 1083 ntBASIC22.7■■□□□ 1.22
Usp33Q8R5K2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp33Q8R5K2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Usp33Q8R5K2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Usp33Q8R5K2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Gm10653-202ENSMUST00000139570 835 ntBASIC22.69■■□□□ 1.22
Usp33Q8R5K2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp33Q8R5K2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Usp33Q8R5K2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp33Q8R5K2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Usp33Q8R5K2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.66■■□□□ 1.22
Usp33Q8R5K2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.65■■□□□ 1.22
Usp33Q8R5K2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
Usp33Q8R5K2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Usp33Q8R5K2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Usp33Q8R5K2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Usp33Q8R5K2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Usp33Q8R5K2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp33Q8R5K2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp33Q8R5K2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.63■■□□□ 1.21
Usp33Q8R5K2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Usp33Q8R5K2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.63■■□□□ 1.21
Usp33Q8R5K2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Usp33Q8R5K2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp33Q8R5K2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp33Q8R5K2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.62■■□□□ 1.21
Usp33Q8R5K2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Usp33Q8R5K2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms