Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Gm28877-201ENSMUST00000191349 604 ntBASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cacnb1Q8R3Z5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Cacnb1Q8R3Z5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Gm18515-201ENSMUST00000219755 797 ntBASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Cacnb1Q8R3Z5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Gm27454-201ENSMUST00000185090 204 ntBASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.94■■□□□ 1.1
Cacnb1Q8R3Z5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Gm45251-201ENSMUST00000209486 1465 ntBASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacnb1Q8R3Z5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Gm22993-201ENSMUST00000175423 254 ntBASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacnb1Q8R3Z5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacnb1Q8R3Z5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Gm45417-201ENSMUST00000209533 758 ntBASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.9■■□□□ 1.1
Cacnb1Q8R3Z5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacnb1Q8R3Z5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Cacnb1Q8R3Z5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacnb1Q8R3Z5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cacnb1Q8R3Z5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacnb1Q8R3Z5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacnb1Q8R3Z5 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.89■■□□□ 1.09
Cacnb1Q8R3Z5 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Cacnb1Q8R3Z5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cacnb1Q8R3Z5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Cacnb1Q8R3Z5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cacnb1Q8R3Z5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms