Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.68■□□□□ 0.74
Nudcd3Q8R1N4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.67■□□□□ 0.74
Nudcd3Q8R1N4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nudcd3Q8R1N4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nudcd3Q8R1N4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nudcd3Q8R1N4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nudcd3Q8R1N4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nudcd3Q8R1N4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nudcd3Q8R1N4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nudcd3Q8R1N4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nudcd3Q8R1N4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nudcd3Q8R1N4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nudcd3Q8R1N4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nudcd3Q8R1N4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nudcd3Q8R1N4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Gm7143-201ENSMUST00000222811 859 ntBASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nudcd3Q8R1N4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nudcd3Q8R1N4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nudcd3Q8R1N4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Nudcd3Q8R1N4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nudcd3Q8R1N4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Nudcd3Q8R1N4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms