Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Gm13534-201ENSMUST00000121169 513 ntBASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Gm44672-201ENSMUST00000206944 1098 ntBASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Col23a1Q8K4G2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col23a1Q8K4G2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.39■■□□□ 1.49
Col23a1Q8K4G2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
Col23a1Q8K4G2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.38■■□□□ 1.49
Col23a1Q8K4G2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.38■■□□□ 1.49
Col23a1Q8K4G2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col23a1Q8K4G2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col23a1Q8K4G2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col23a1Q8K4G2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col23a1Q8K4G2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col23a1Q8K4G2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Gm26524-201ENSMUST00000192339 390 ntBASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col23a1Q8K4G2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col23a1Q8K4G2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Col23a1Q8K4G2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col23a1Q8K4G2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24.32■■□□□ 1.48
Col23a1Q8K4G2 Gm27275-201ENSMUST00000184318 272 ntBASIC24.32■■□□□ 1.48
Col23a1Q8K4G2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col23a1Q8K4G2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Col23a1Q8K4G2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col23a1Q8K4G2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col23a1Q8K4G2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col23a1Q8K4G2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms