Protein–RNA interactions for Protein: Q8K2Z4

Ncapd2, Condensin complex subunit 1, mousemouse

Predictions only

Length 1,392 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd2Q8K2Z4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ncapd2Q8K2Z4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ncapd2Q8K2Z4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Gm12527-201ENSMUST00000117967 564 ntBASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ncapd2Q8K2Z4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC26.33■■□□□ 1.81
Ncapd2Q8K2Z4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
Ncapd2Q8K2Z4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.33■■□□□ 1.8
Ncapd2Q8K2Z4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ncapd2Q8K2Z4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ncapd2Q8K2Z4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ncapd2Q8K2Z4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ncapd2Q8K2Z4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Ncapd2Q8K2Z4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ncapd2Q8K2Z4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC26.31■■□□□ 1.8
Ncapd2Q8K2Z4 Gm22240-201ENSMUST00000175225 82 ntBASIC26.31■■□□□ 1.8
Ncapd2Q8K2Z4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Ncapd2Q8K2Z4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Ncapd2Q8K2Z4 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.3■■□□□ 1.8
Ncapd2Q8K2Z4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ncapd2Q8K2Z4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ncapd2Q8K2Z4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ncapd2Q8K2Z4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Gm10252-201ENSMUST00000209541 832 ntBASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ncapd2Q8K2Z4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ncapd2Q8K2Z4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.27■■□□□ 1.8
Ncapd2Q8K2Z4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ncapd2Q8K2Z4 Gm13146-201ENSMUST00000118508 780 ntBASIC26.27■■□□□ 1.8
Ncapd2Q8K2Z4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ncapd2Q8K2Z4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Gm13148-201ENSMUST00000118892 745 ntBASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Gm8520-201ENSMUST00000186517 868 ntBASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Ncapd2Q8K2Z4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Ncapd2Q8K2Z4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ncapd2Q8K2Z4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ncapd2Q8K2Z4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC26.23■■□□□ 1.79
Ncapd2Q8K2Z4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Ncapd2Q8K2Z4 Gm6277-202ENSMUST00000224036 2779 ntBASIC26.21■■□□□ 1.79
Ncapd2Q8K2Z4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ncapd2Q8K2Z4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.21■■□□□ 1.79
Ncapd2Q8K2Z4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ncapd2Q8K2Z4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Ncapd2Q8K2Z4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ncapd2Q8K2Z4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.2■■□□□ 1.79
Ncapd2Q8K2Z4 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.2■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms