Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Depdc1aQ8CIG0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.38■■□□□ 1.17
Depdc1aQ8CIG0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Gm27801-201ENSMUST00000184174 223 ntBASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Gm42642-201ENSMUST00000200683 355 ntBASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.37■■□□□ 1.17
Depdc1aQ8CIG0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1aQ8CIG0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Gm10849-201ENSMUST00000100397 618 ntBASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1aQ8CIG0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1aQ8CIG0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.33■■□□□ 1.17
Depdc1aQ8CIG0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.33■■□□□ 1.17
Depdc1aQ8CIG0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1aQ8CIG0 Gm10033-202ENSMUST00000211874 928 ntBASIC22.33■■□□□ 1.17
Depdc1aQ8CIG0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1aQ8CIG0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1aQ8CIG0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1aQ8CIG0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1aQ8CIG0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1aQ8CIG0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 AA386476-201ENSMUST00000098781 1665 ntBASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1aQ8CIG0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1aQ8CIG0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1aQ8CIG0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms