Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim5Q8CI51 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pdlim5Q8CI51 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim5Q8CI51 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim5Q8CI51 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim5Q8CI51 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim5Q8CI51 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim5Q8CI51 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pdlim5Q8CI51 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdlim5Q8CI51 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Pdlim5Q8CI51 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim5Q8CI51 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdlim5Q8CI51 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim5Q8CI51 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdlim5Q8CI51 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.13■□□□□ 0.49
Pdlim5Q8CI51 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pdlim5Q8CI51 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim5Q8CI51 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim5Q8CI51 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pdlim5Q8CI51 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim5Q8CI51 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Rps24-207ENSMUST00000224568 714 ntBASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim5Q8CI51 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Gm14117-201ENSMUST00000122417 843 ntBASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim5Q8CI51 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim5Q8CI51 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim5Q8CI51 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pdlim5Q8CI51 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim5Q8CI51 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.08■□□□□ 0.48
Pdlim5Q8CI51 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pdlim5Q8CI51 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim5Q8CI51 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim5Q8CI51 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim5Q8CI51 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim5Q8CI51 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms