Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PdgfcQ8CI19 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.89■■□□□ 1.1
PdgfcQ8CI19 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PdgfcQ8CI19 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.89■■□□□ 1.09
PdgfcQ8CI19 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PdgfcQ8CI19 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PdgfcQ8CI19 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PdgfcQ8CI19 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PdgfcQ8CI19 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PdgfcQ8CI19 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PdgfcQ8CI19 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PdgfcQ8CI19 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PdgfcQ8CI19 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.86■■□□□ 1.09
PdgfcQ8CI19 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PdgfcQ8CI19 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.86■■□□□ 1.09
PdgfcQ8CI19 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PdgfcQ8CI19 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PdgfcQ8CI19 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PdgfcQ8CI19 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.83■■□□□ 1.09
PdgfcQ8CI19 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.83■■□□□ 1.09
PdgfcQ8CI19 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.83■■□□□ 1.09
PdgfcQ8CI19 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PdgfcQ8CI19 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PdgfcQ8CI19 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PdgfcQ8CI19 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PdgfcQ8CI19 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PdgfcQ8CI19 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PdgfcQ8CI19 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PdgfcQ8CI19 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PdgfcQ8CI19 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PdgfcQ8CI19 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PdgfcQ8CI19 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.81■■□□□ 1.08
PdgfcQ8CI19 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.81■■□□□ 1.08
PdgfcQ8CI19 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.81■■□□□ 1.08
PdgfcQ8CI19 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PdgfcQ8CI19 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.8■■□□□ 1.08
PdgfcQ8CI19 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
PdgfcQ8CI19 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms