Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh1Q8CGV4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh1Q8CGV4 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.22■□□□□ 0.67
Rdh1Q8CGV4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh1Q8CGV4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh1Q8CGV4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.22■□□□□ 0.67
Rdh1Q8CGV4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh1Q8CGV4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh1Q8CGV4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Rdh1Q8CGV4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh1Q8CGV4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh1Q8CGV4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gm26571-201ENSMUST00000181399 666 ntBASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.17■□□□□ 0.66
Rdh1Q8CGV4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh1Q8CGV4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms