Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm13234-201ENSMUST00000120010 747 ntBASIC19.28■□□□□ 0.68
Rab43Q8CG50 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab43Q8CG50 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab43Q8CG50 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab43Q8CG50 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Rab43Q8CG50 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rab43Q8CG50 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab43Q8CG50 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab43Q8CG50 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab43Q8CG50 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab43Q8CG50 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab43Q8CG50 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rab43Q8CG50 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.27■□□□□ 0.68
Rab43Q8CG50 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rab43Q8CG50 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab43Q8CG50 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rab43Q8CG50 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab43Q8CG50 Reep4-203ENSMUST00000226563 1444 ntBASIC19.25■□□□□ 0.67
Rab43Q8CG50 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Gm10602-201ENSMUST00000098239 609 ntBASIC19.25■□□□□ 0.67
Rab43Q8CG50 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Rab43Q8CG50 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab43Q8CG50 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.23■□□□□ 0.67
Rab43Q8CG50 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.23■□□□□ 0.67
Rab43Q8CG50 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab43Q8CG50 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rab43Q8CG50 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.22■□□□□ 0.67
Rab43Q8CG50 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rab43Q8CG50 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab43Q8CG50 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Gm12933-201ENSMUST00000120203 872 ntBASIC19.21■□□□□ 0.67
Rab43Q8CG50 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms