Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
Smc5Q8CG46 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC24.51■■□□□ 1.51
Smc5Q8CG46 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Smc5Q8CG46 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.51■■□□□ 1.51
Smc5Q8CG46 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc5Q8CG46 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Golph3-205ENSMUST00000228671 2842 ntBASIC24.5■■□□□ 1.51
Smc5Q8CG46 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc5Q8CG46 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc5Q8CG46 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Smc5Q8CG46 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc5Q8CG46 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc5Q8CG46 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.47■■□□□ 1.51
Smc5Q8CG46 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc5Q8CG46 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc5Q8CG46 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc5Q8CG46 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc5Q8CG46 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc5Q8CG46 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Smc5Q8CG46 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.46■■□□□ 1.51
Smc5Q8CG46 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc5Q8CG46 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
Smc5Q8CG46 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Smc5Q8CG46 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.45■■□□□ 1.5
Smc5Q8CG46 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smc5Q8CG46 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smc5Q8CG46 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC24.45■■□□□ 1.5
Smc5Q8CG46 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.44■■□□□ 1.5
Smc5Q8CG46 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc5Q8CG46 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc5Q8CG46 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc5Q8CG46 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Smc5Q8CG46 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Smc5Q8CG46 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Smc5Q8CG46 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc5Q8CG46 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc5Q8CG46 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Smc5Q8CG46 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.42■■□□□ 1.5
Smc5Q8CG46 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc5Q8CG46 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Gm5784-201ENSMUST00000179344 2478 ntBASIC24.41■■□□□ 1.5
Smc5Q8CG46 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms