Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc28aQ8CEI3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc28aQ8CEI3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc28aQ8CEI3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc28aQ8CEI3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28aQ8CEI3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28aQ8CEI3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc28aQ8CEI3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28aQ8CEI3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc28aQ8CEI3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28aQ8CEI3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms