Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.77■□□□□ 0.92
Q8CD60 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.77■□□□□ 0.92
Q8CD60 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q8CD60 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8CD60 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q8CD60 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q8CD60 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Q8CD60 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.75■□□□□ 0.91
Q8CD60 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Mir7075-201ENSMUST00000184187 82 ntBASIC20.75■□□□□ 0.91
Q8CD60 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.75■□□□□ 0.91
Q8CD60 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Q8CD60 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Q8CD60 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q8CD60 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.75■□□□□ 0.91
Q8CD60 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q8CD60 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
Q8CD60 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8CD60 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.74■□□□□ 0.91
Q8CD60 Spcs1-204ENSMUST00000226782 949 ntBASIC20.74■□□□□ 0.91
Q8CD60 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8CD60 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8CD60 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8CD60 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8CD60 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q8CD60 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
Q8CD60 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8CD60 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8CD60 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.72■□□□□ 0.91
Q8CD60 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Q8CD60 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.72■□□□□ 0.91
Q8CD60 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.72■□□□□ 0.91
Q8CD60 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Q8CD60 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Q8CD60 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Q8CD60 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.72■□□□□ 0.91
Q8CD60 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8CD60 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8CD60 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8CD60 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8CD60 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8CD60 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.71■□□□□ 0.91
Q8CD60 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8CD60 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.7■□□□□ 0.9
Q8CD60 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.7■□□□□ 0.9
Q8CD60 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.7■□□□□ 0.9
Q8CD60 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8CD60 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Q8CD60 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.69■□□□□ 0.9
Q8CD60 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.69■□□□□ 0.9
Q8CD60 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8CD60 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Q8CD60 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q8CD60 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q8CD60 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q8CD60 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q8CD60 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Q8CD60 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q8CD60 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms