Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brat1Q8C3R1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.84■□□□□ 0.93
Brat1Q8C3R1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brat1Q8C3R1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Brat1Q8C3R1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.83■□□□□ 0.93
Brat1Q8C3R1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Brat1Q8C3R1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Brat1Q8C3R1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Brat1Q8C3R1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brat1Q8C3R1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Brat1Q8C3R1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Brat1Q8C3R1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brat1Q8C3R1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brat1Q8C3R1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brat1Q8C3R1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brat1Q8C3R1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brat1Q8C3R1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brat1Q8C3R1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brat1Q8C3R1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brat1Q8C3R1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brat1Q8C3R1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Brat1Q8C3R1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Brat1Q8C3R1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brat1Q8C3R1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Brat1Q8C3R1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Brat1Q8C3R1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Brat1Q8C3R1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms