Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp44Q8C2S0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 AA386476-201ENSMUST00000098781 1665 ntBASIC23.23■■□□□ 1.31
Usp44Q8C2S0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Gm6139-201ENSMUST00000079261 882 ntBASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.23■■□□□ 1.31
Usp44Q8C2S0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Gm43173-201ENSMUST00000202246 593 ntBASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp44Q8C2S0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp44Q8C2S0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Serp2-204ENSMUST00000228055 705 ntBASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Usp44Q8C2S0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Notumos-201ENSMUST00000151998 2659 ntBASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp44Q8C2S0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Usp44Q8C2S0 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp44Q8C2S0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms