Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim35Q8C006 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim35Q8C006 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim35Q8C006 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim35Q8C006 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim35Q8C006 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.98■□□□□ 0.79
Trim35Q8C006 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim35Q8C006 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim35Q8C006 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim35Q8C006 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim35Q8C006 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.98■□□□□ 0.79
Trim35Q8C006 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim35Q8C006 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim35Q8C006 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim35Q8C006 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim35Q8C006 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.97■□□□□ 0.79
Trim35Q8C006 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.97■□□□□ 0.79
Trim35Q8C006 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim35Q8C006 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Gm36943-201ENSMUST00000194422 282 ntBASIC19.96■□□□□ 0.79
Trim35Q8C006 Gm18377-201ENSMUST00000215141 607 ntBASIC19.96■□□□□ 0.79
Trim35Q8C006 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.96■□□□□ 0.79
Trim35Q8C006 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trim35Q8C006 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.96■□□□□ 0.79
Trim35Q8C006 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim35Q8C006 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Gm15039-201ENSMUST00000118914 875 ntBASIC19.95■□□□□ 0.78
Trim35Q8C006 AC106830.1-201ENSMUST00000228032 1003 ntBASIC19.95■□□□□ 0.78
Trim35Q8C006 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Trim35Q8C006 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim35Q8C006 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim35Q8C006 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim35Q8C006 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim35Q8C006 Gm13366-201ENSMUST00000122198 970 ntBASIC19.94■□□□□ 0.78
Trim35Q8C006 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim35Q8C006 Gm7143-201ENSMUST00000222811 859 ntBASIC19.94■□□□□ 0.78
Trim35Q8C006 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim35Q8C006 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim35Q8C006 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim35Q8C006 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim35Q8C006 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim35Q8C006 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim35Q8C006 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim35Q8C006 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim35Q8C006 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Trim35Q8C006 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim35Q8C006 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim35Q8C006 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.92■□□□□ 0.78
Trim35Q8C006 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Trim35Q8C006 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim35Q8C006 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim35Q8C006 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim35Q8C006 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim35Q8C006 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Gm5244-202ENSMUST00000189517 743 ntBASIC19.91■□□□□ 0.78
Trim35Q8C006 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim35Q8C006 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trim35Q8C006 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim35Q8C006 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim35Q8C006 Gm37744-201ENSMUST00000194616 1590 ntBASIC19.91■□□□□ 0.78
Trim35Q8C006 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim35Q8C006 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim35Q8C006 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim35Q8C006 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim35Q8C006 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim35Q8C006 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim35Q8C006 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim35Q8C006 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim35Q8C006 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim35Q8C006 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms