Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pbrm1Q8BSQ9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC31.61■■■□□ 2.65
Pbrm1Q8BSQ9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pbrm1Q8BSQ9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Pbrm1Q8BSQ9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Pbrm1Q8BSQ9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Pbrm1Q8BSQ9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC31.6■■■□□ 2.65
Pbrm1Q8BSQ9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pbrm1Q8BSQ9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Pbrm1Q8BSQ9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC31.58■■■□□ 2.65
Pbrm1Q8BSQ9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pbrm1Q8BSQ9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pbrm1Q8BSQ9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Pbrm1Q8BSQ9 Rab3c-203ENSMUST00000224180 967 ntBASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Pbrm1Q8BSQ9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 Gm27275-201ENSMUST00000184318 272 ntBASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pbrm1Q8BSQ9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC31.55■■■□□ 2.64
Pbrm1Q8BSQ9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pbrm1Q8BSQ9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pbrm1Q8BSQ9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pbrm1Q8BSQ9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Pbrm1Q8BSQ9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pbrm1Q8BSQ9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pbrm1Q8BSQ9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pbrm1Q8BSQ9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pbrm1Q8BSQ9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pbrm1Q8BSQ9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pbrm1Q8BSQ9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pbrm1Q8BSQ9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pbrm1Q8BSQ9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC31.52■■■□□ 2.64
Pbrm1Q8BSQ9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Pbrm1Q8BSQ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pbrm1Q8BSQ9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pbrm1Q8BSQ9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pbrm1Q8BSQ9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pbrm1Q8BSQ9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pbrm1Q8BSQ9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pbrm1Q8BSQ9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pbrm1Q8BSQ9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pbrm1Q8BSQ9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pbrm1Q8BSQ9 Gm29994-201ENSMUST00000195495 1193 ntBASIC31.48■■■□□ 2.63
Pbrm1Q8BSQ9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Pbrm1Q8BSQ9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pbrm1Q8BSQ9 Gm42911-201ENSMUST00000199360 1630 ntBASIC31.47■■■□□ 2.63
Pbrm1Q8BSQ9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC31.47■■■□□ 2.63
Pbrm1Q8BSQ9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pbrm1Q8BSQ9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Gm37415-201ENSMUST00000192265 2054 ntBASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pbrm1Q8BSQ9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Pbrm1Q8BSQ9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pbrm1Q8BSQ9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Pbrm1Q8BSQ9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC31.45■■■□□ 2.62
Pbrm1Q8BSQ9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC31.45■■■□□ 2.62
Pbrm1Q8BSQ9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Pbrm1Q8BSQ9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Pbrm1Q8BSQ9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
Pbrm1Q8BSQ9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC31.44■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms