Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc43a1Q8BSM7 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc43a1Q8BSM7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc43a1Q8BSM7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc43a1Q8BSM7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc43a1Q8BSM7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Gm13234-201ENSMUST00000120010 747 ntBASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc43a1Q8BSM7 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc43a1Q8BSM7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Reep4-203ENSMUST00000226563 1444 ntBASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc43a1Q8BSM7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc43a1Q8BSM7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc43a1Q8BSM7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc43a1Q8BSM7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc43a1Q8BSM7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms