Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.1■□□□□ 0.81
Suds3Q8BR65 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.1■□□□□ 0.81
Suds3Q8BR65 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Suds3Q8BR65 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.09■□□□□ 0.81
Suds3Q8BR65 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Suds3Q8BR65 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Suds3Q8BR65 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.08■□□□□ 0.81
Suds3Q8BR65 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Suds3Q8BR65 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Suds3Q8BR65 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Suds3Q8BR65 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Suds3Q8BR65 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Suds3Q8BR65 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Suds3Q8BR65 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Suds3Q8BR65 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Suds3Q8BR65 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Suds3Q8BR65 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Gm27454-201ENSMUST00000185090 204 ntBASIC20.04■□□□□ 0.8
Suds3Q8BR65 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Gm45417-201ENSMUST00000209533 758 ntBASIC20.04■□□□□ 0.8
Suds3Q8BR65 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.04■□□□□ 0.8
Suds3Q8BR65 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Suds3Q8BR65 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms