Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco3Q8BQM7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco3Q8BQM7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco3Q8BQM7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smco3Q8BQM7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smco3Q8BQM7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco3Q8BQM7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Gm27502-201ENSMUST00000183495 199 ntBASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco3Q8BQM7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smco3Q8BQM7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms