Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp1Q8BJQ2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp1Q8BJQ2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp1Q8BJQ2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.95■□□□□ 0.94
Usp1Q8BJQ2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp1Q8BJQ2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp1Q8BJQ2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp1Q8BJQ2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp1Q8BJQ2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp1Q8BJQ2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Usp1Q8BJQ2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp1Q8BJQ2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp1Q8BJQ2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp1Q8BJQ2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp1Q8BJQ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Usp1Q8BJQ2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp1Q8BJQ2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp1Q8BJQ2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp1Q8BJQ2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp1Q8BJQ2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp1Q8BJQ2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp1Q8BJQ2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms