Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcal1Q8BJL0 Gm27011-201ENSMUST00000182352 972 ntBASIC21.08■□□□□ 0.97
Smarcal1Q8BJL0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.08■□□□□ 0.97
Smarcal1Q8BJL0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarcal1Q8BJL0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarcal1Q8BJL0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcal1Q8BJL0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Smarcal1Q8BJL0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.06■□□□□ 0.96
Smarcal1Q8BJL0 Gm7514-201ENSMUST00000209475 934 ntBASIC21.06■□□□□ 0.96
Smarcal1Q8BJL0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.06■□□□□ 0.96
Smarcal1Q8BJL0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcal1Q8BJL0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcal1Q8BJL0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcal1Q8BJL0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcal1Q8BJL0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.04■□□□□ 0.96
Smarcal1Q8BJL0 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.04■□□□□ 0.96
Smarcal1Q8BJL0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Smarcal1Q8BJL0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcal1Q8BJL0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcal1Q8BJL0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcal1Q8BJL0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcal1Q8BJL0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcal1Q8BJL0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Smarcal1Q8BJL0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Smarcal1Q8BJL0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarcal1Q8BJL0 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smarcal1Q8BJL0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcal1Q8BJL0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcal1Q8BJL0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcal1Q8BJL0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.99■□□□□ 0.95
Smarcal1Q8BJL0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcal1Q8BJL0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcal1Q8BJL0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Smarcal1Q8BJL0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcal1Q8BJL0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.97■□□□□ 0.95
Smarcal1Q8BJL0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms