Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
Chmp2bQ8BJF9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Gm15820-201ENSMUST00000201566 728 ntBASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2bQ8BJF9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2bQ8BJF9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Mir6236-201ENSMUST00000184437 123 ntBASIC20.08■□□□□ 0.81
Chmp2bQ8BJF9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp2bQ8BJF9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp2bQ8BJF9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp2bQ8BJF9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp2bQ8BJF9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp2bQ8BJF9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2bQ8BJF9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2bQ8BJF9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2bQ8BJF9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.06■□□□□ 0.8
Chmp2bQ8BJF9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2bQ8BJF9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2bQ8BJF9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chmp2bQ8BJF9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2bQ8BJF9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2bQ8BJF9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms