Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmbox1Q8BJA3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hmbox1Q8BJA3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmbox1Q8BJA3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmbox1Q8BJA3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmbox1Q8BJA3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmbox1Q8BJA3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmbox1Q8BJA3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Hmbox1Q8BJA3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmbox1Q8BJA3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmbox1Q8BJA3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmbox1Q8BJA3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmbox1Q8BJA3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hmbox1Q8BJA3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hmbox1Q8BJA3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
Hmbox1Q8BJA3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmbox1Q8BJA3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmbox1Q8BJA3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmbox1Q8BJA3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmbox1Q8BJA3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Hmbox1Q8BJA3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmbox1Q8BJA3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Hmbox1Q8BJA3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hmbox1Q8BJA3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmbox1Q8BJA3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Hmbox1Q8BJA3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms