Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tdp1Q8BJ37 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tdp1Q8BJ37 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.89■■□□□ 1.1
Tdp1Q8BJ37 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tdp1Q8BJ37 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tdp1Q8BJ37 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tdp1Q8BJ37 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tdp1Q8BJ37 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.89■■□□□ 1.09
Tdp1Q8BJ37 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.89■■□□□ 1.09
Tdp1Q8BJ37 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tdp1Q8BJ37 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tdp1Q8BJ37 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tdp1Q8BJ37 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tdp1Q8BJ37 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.86■■□□□ 1.09
Tdp1Q8BJ37 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tdp1Q8BJ37 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tdp1Q8BJ37 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tdp1Q8BJ37 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.86■■□□□ 1.09
Tdp1Q8BJ37 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tdp1Q8BJ37 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tdp1Q8BJ37 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tdp1Q8BJ37 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.84■■□□□ 1.09
Tdp1Q8BJ37 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Tdp1Q8BJ37 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tdp1Q8BJ37 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.83■■□□□ 1.09
Tdp1Q8BJ37 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Tdp1Q8BJ37 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.83■■□□□ 1.08
Tdp1Q8BJ37 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Tdp1Q8BJ37 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tdp1Q8BJ37 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.81■■□□□ 1.08
Tdp1Q8BJ37 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.8■■□□□ 1.08
Tdp1Q8BJ37 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms