Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smndc1Q8BGT7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smndc1Q8BGT7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smndc1Q8BGT7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Smndc1Q8BGT7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smndc1Q8BGT7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smndc1Q8BGT7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Gm9959-201ENSMUST00000068277 390 ntBASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smndc1Q8BGT7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms