Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.41■□□□□ 0.7
Ubp1Q811S7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubp1Q811S7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ubp1Q811S7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ubp1Q811S7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubp1Q811S7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ubp1Q811S7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.38■□□□□ 0.69
Ubp1Q811S7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubp1Q811S7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ubp1Q811S7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubp1Q811S7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Ubp1Q811S7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.36■□□□□ 0.69
Ubp1Q811S7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.36■□□□□ 0.69
Ubp1Q811S7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubp1Q811S7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.35■□□□□ 0.69
Ubp1Q811S7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ubp1Q811S7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ubp1Q811S7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ubp1Q811S7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ubp1Q811S7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms