Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.01■□□□□ 0.47
Zc3hc1Q80YV2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Zc3hc1Q80YV2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Zc3hc1Q80YV2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3hc1Q80YV2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3hc1Q80YV2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18■□□□□ 0.47
Zc3hc1Q80YV2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3hc1Q80YV2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3hc1Q80YV2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3hc1Q80YV2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3hc1Q80YV2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.99■□□□□ 0.47
Zc3hc1Q80YV2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3hc1Q80YV2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3hc1Q80YV2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3hc1Q80YV2 Mir6236-201ENSMUST00000184437 123 ntBASIC17.96■□□□□ 0.47
Zc3hc1Q80YV2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3hc1Q80YV2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3hc1Q80YV2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3hc1Q80YV2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.95■□□□□ 0.46
Zc3hc1Q80YV2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3hc1Q80YV2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3hc1Q80YV2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Zc3hc1Q80YV2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3hc1Q80YV2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Gm10232-201ENSMUST00000089221 720 ntBASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3hc1Q80YV2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Zc3hc1Q80YV2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Gm5921-201ENSMUST00000075898 882 ntBASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3hc1Q80YV2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Zc3hc1Q80YV2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3hc1Q80YV2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3hc1Q80YV2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3hc1Q80YV2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
Zc3hc1Q80YV2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3hc1Q80YV2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms