Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vrk1Q80X41 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.84■□□□□ 0.61
Vrk1Q80X41 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vrk1Q80X41 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vrk1Q80X41 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vrk1Q80X41 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vrk1Q80X41 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.83■□□□□ 0.6
Vrk1Q80X41 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.83■□□□□ 0.6
Vrk1Q80X41 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vrk1Q80X41 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vrk1Q80X41 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vrk1Q80X41 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vrk1Q80X41 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vrk1Q80X41 Gm9988-201ENSMUST00000069786 435 ntBASIC18.82■□□□□ 0.6
Vrk1Q80X41 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vrk1Q80X41 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.81■□□□□ 0.6
Vrk1Q80X41 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vrk1Q80X41 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.8■□□□□ 0.6
Vrk1Q80X41 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vrk1Q80X41 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vrk1Q80X41 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Vrk1Q80X41 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vrk1Q80X41 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.78■□□□□ 0.6
Vrk1Q80X41 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.77■□□□□ 0.6
Vrk1Q80X41 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vrk1Q80X41 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vrk1Q80X41 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vrk1Q80X41 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms