Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh19Q80TF3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh19Q80TF3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh19Q80TF3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh19Q80TF3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh19Q80TF3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh19Q80TF3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh19Q80TF3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Pcdh19Q80TF3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh19Q80TF3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh19Q80TF3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh19Q80TF3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh19Q80TF3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh19Q80TF3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh19Q80TF3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh19Q80TF3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh19Q80TF3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh19Q80TF3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh19Q80TF3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdh19Q80TF3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms