Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx4Q7TNK1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx4Q7TNK1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Gm12366-201ENSMUST00000121722 873 ntBASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Gm5786-201ENSMUST00000085368 882 ntBASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rfx4Q7TNK1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Rfx4Q7TNK1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx4Q7TNK1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx4Q7TNK1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx4Q7TNK1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rfx4Q7TNK1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx4Q7TNK1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx4Q7TNK1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Rfx4Q7TNK1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx4Q7TNK1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms